Dr. Mamatha Bhat MD, MSc, PhD, FRCPC
(she/her)
Hepatologist & Co-Lead of Transplant AI initiative (TAI),
Ajmera Transplant Program Scientist, Toronto General Hospital Research Institute, University Health Network
- Associate Professor, Division of Gastroenterology & Hepatology
- Director, Clinician-Scientist Training Program (CSTP), Department of Medicine, University of Toronto
- Partnerships & Engagement Lead, Temerty Centre for AI in Research & Education in Medicine (T-CAIREM); Faculty Affiliate, Vector
Dr. Mamatha Bhat is a Hepatologist and Clinician-Scientist at UHN’s Ajmera Transplant Centre, and an Assistant Professor of Medicine at the University of Toronto. She is also a Scientist at Toronto General Hospital Research Institute and has a graduate appointment with the Institute of Medical Sciences. Dr. Bhat completed her medical school and residency training, including the Clinician Investigator Program, at McGill University. She then completed a Transplant Hepatology fellowship at the Mayo Clinic in Rochester, Minnesota, followed by a Canadian Institutes of Health Research (CIHR) Fellowship for Health Professionals, through which she completed a PhD in Medical Biophysics (U of T).
The goal of Dr. Bhat’s research program is to improve long-term outcomes of liver transplantation through a precision medicine approach. Her program is unique in using tools of Artificial Intelligence with bioinformatics to personalize the care of liver transplant recipients based on an improved biological understanding of the liver and disease after transplant. Her interdisciplinary program and team have been supported by CIHR, Terry Fox Research Institute, Stem Cell Network, Canadian Donation and Transplant Research Program, Natural Sciences and Engineering Research Council (NSERC), Canadian Liver Foundation (CLF), among others. Dr. Bhat is on the Executive committee of the CDTRP; Vice-Chair of the International Liver Transplant Society Basic and Translational Science Research committee; and is an Associate Editor for the American Journal of Transplantation. Dr. Bhat has also been the recipient of recognitions such as the 2022 CIHR-INMD-CASL Early Career Researcher prize, the 2020 Polanyi Prize and the 2021 American Society of Transplantation Basic Science Career Development Award.
Current Lab Members
Elisa Pasini
Residency in Laboratory Medicine and Pathobiology, Udine, Italy.
MSc in Biological Sciences with Pathophysiology Specialty, Bologna, Italy.
Current Research:
- Analyst involved in most of the projects in the lab and helps in student supervision
- Integration of multi-omics data in liver cancer and post-transplant diseases
- Network analysis and graphical visualization of protein-protein-interactions in liver cancer and post-transplant diseases
- Molecular validation of bioinformatics predictions for liver diseases
Cristina Baciu
Scientific Associate
PhD in Bioinformatics and Computational Biology – UNC Charlotte, USA
MS in Biochemistry / Computational Chemistry – Univ. of Windsor, ON
BSc in Chemical Engineering – Technical Univ. Ghe. Asachi -Iasi, Romania
Current Research:
- Contributing to developing a machine learning tool leveraging methylation patterns in cell free DNA and clinical data, as non-invasive biomarker for graft pathology and liver diseases in general.
- Overseeing the basic research projects in the lab, helps with grant applications, collaborative projects and bioinformatics analyses. She has extensive experience in cancer research, biomarker discovery in various diseases, multi-omics data integration, network and pathway analysis.
Sameera Rizvi
Clinical Research Coordinator
Graduated from Medical school at Dow Medical University, Karachi, Pakistan
Post Graduate Diploma in Clinical Research Associates- 1994.
Current Research:
- The GLP-1 agonist Semaglutide for the treatment of Metabolic Disease in Liver Transplant Recipients: A Phase IV, randomized trial
- Plasma cell-free methylated DNA (cfMeDIP-seq): A non-invasive, Specific Marker for Liver Disease and Graft Pathology
- Screening for Post-Transplant NAFLD to Optimize Outcomes
- Prevention of Metabolic Disease Post-Transplant with Prebiotics: A Randomized, Placebo-controlled Crossover Trial
Yingji Sun
(Co –supervised with Prof. Michael Brudno and Dr Aman Sidhu) TAI Initiative
Yingji Sun is a Machine Learning Analyst who joined our lab as in December 2021. With a Master of Science in Biostatistics – Dalla Lana School of Public Health, University of Toronto
Honours BSc in Physiology and Statistics – University of Toronto
Current Research:
- Employing machine learning methods to predict the survival trajectories of NASH patients and PSC patients on liver transplant waitlist
Graduate Students
Yilin Sun
- DoM QEII award University of Toronto
- Master of Science Candidate – Institute of Medical Science, University of Toronto
- Honours BSc in Biomedical Sciences and minor in neuroscience, University of Guelph
Current Research:
- Identifying exosomal biomarkers in plasma of normal vs abnormal liver regeneration
Alyssa Apilan
Master of Applied Science Candidate – Institute of Biomedical Engineering, University of Toronto
Previous Education: Honours BSc in Biology, McMaster University
Current Research:
- Dexamining the role of porphysomes in the context of image-guided treatment for hepatocellular carcinoma using animal models
Medical Students
Xiaoting You
Nimit Vediya
Aditi Venkatraman
Anushka Patel
Yi-Hsuan Yeh
Current Undergraduate Students
Priya Sheth
Arya Rahmani
Mouaid Alim
Aarian Bhakoo
Rhea Varghese
Khyathi Rao
Serena Bansal
Cherry Xu
Jason Yang
Lab Alumni
Hussein Haman
Post-Doc Fellow (June 2024-November 2024).
Catherine Chen
Fall Student (2020 Sep-2021 Apr, 2019 Sep – 2020 Apr, 2018 Sep – 2019 Apr)
Shruti Misra
Fall Student (2020 Sep- 2021 Apr, 2019 Sep – 2020 Apr)
Summer Student (2019 May – 2019 Aug)
Cindy Wei
Fall Student (2020 Sep- 2021 Apr)
Peihao Li
Fall Student (2019 Sep – 2020 Apr)
Cathy Yang
Fall Student (2019 Sep – 2020 Apr), Summer Student (2019 May – 2019 Aug)
Nan Ji Suo
Fall Student (2019 Sep – 2020 Apr)
Andrew Rogalsky
Summer Student (2019 May – 2019 Aug)
Praniya Nesan
Summer Student (2019 May – 2019 Aug)
Catherine Hu
Summer Student (2019 May – 2019 Aug)
Cherie Tang
Summer Student (2019 May – 2019 Aug)
Madhumitha Rabindranath
(Sept 2021 – June 2023)
Fuad Mohammad
Transplant Hepatology fellow
Ahmed Marwan Mansour
Transplant Hepatology fellow
Maryam Naghibzadeh
(June 2022-July 2023)
Anita Bakrania
(January 2021-July 2023)
Amirhossein Azhie
(2019-2022), Post Transplant NASH
Fakhar Ali Qazi Arisar
Machine Learning in Liver Transplantation, NASH
Victor Dong
(2019-2020), Outcomes of Liver Transplantation for Patients with NASH Cirrhosis in ICU at Time of Transplant.
Neta Gottlieb
(2020-2021), Machine Learning in Liver Transplantation
Chinmay Bera
(2019-2021), Changes in Long-term Survival and Causes of Mortality After Liver Transplantation.
Amanpreet Brar
(2020 – 2022) – Molecular Machine Learning in HCC
Saranya Sivaraj
(2019 Apr – 2020 Nov), Probiotics to prevent the Progression of Non-alcoholic Steatohepatitis to Cirrhosis
Graziano Oldani
(2018 Dec – 2020 Jun), Pathway-based Analysis of Liver Regeneration.
Ravi Kiran
(2018 Dec – 2020 Jan), Prediction of Survival after Transplant for NASH Cirrhosis.
Raj Uchila
(2019 Aug – 2020 June), Outcomes of Liver Transplantation for Lean and Obese NASH Cirrhosis.
Saeed Almarzooqi
(2018 Dec – 2019 Oct), Cardiovascular Complications after Liver Transplantation.
Sreelakshmi Kotha
(2018 Dec – 2019), Meta-analysis of Post-transplant diabetes.
Divya Sharma
(2020 Oct – 2021 Sept), Application of ML tools for liver disease detection and analysis.
Radmehr Rahemipour
(2019 Sept – 2021 Sept), Development of Porphysomes as Treatment for Hepatocellular Carcinoma.
Anshu Malik
(2020 Dec – 2021 Sept), Probiotics to prevent the Progression of Non-alcoholic Steatohepatitis to Cirrhosis.
Marc Angeli
(2018 Dec – 2021 Sept), Post-Transplant outcomes.
HEADER IMAGE CREDIT – Bergthaler Group/CeMM
This 3D image depicts the liver at the microscopic level. Liver cells are organized around the central veins to form hexagonal hepatic lobules that are powerhouses of liver metabolism and immune-metabolic regulators upon infection.